PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000124G0270
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family ERF
Protein Properties Length: 223aa    MW: 23772.4 Da    PI: 6.5141
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000124G0270genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.96.7e-1046722753
              AP2 27 krkrfslgkfgtaeeAakaaiaarkkl 53
                      ++r++lg+f taeeAa+a+++a+  +
  PH01000124G0270 46 SKRRVWLGTFETAEEAARAYDEAAVLM 72
                     35*********************9765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103213.2612382IPR001471AP2/ERF domain
SMARTSM003805.3E-122888IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-123883IPR016177DNA-binding domain
PfamPF008474.9E-64569IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-184583IPR001471AP2/ERF domain
CDDcd000183.01E-174784No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MRISTPEKWY NQRSFVESGS ATGAPGSLRS DTPSCLNASM FCNECSKRRV WLGTFETAEE  60
AARAYDEAAV LMSGRNAKTN FPVQRSTTGD LAPVAGRDVR SNGSSSSSTS NLSQILSAKL  120
RKCCKAPSPS LTCLRLDPEK SHIGVWQKRA GARADSNWVM TVELNKEVAS SDAAAQSTSA  180
ATASPATMDD EERIALQMIE ELLSRSSPAS PSHGEDEGSF VI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015627194.11e-105PREDICTED: ethylene-responsive transcription factor WIN1
SwissprotQ9XI332e-56WIN1_ARATH; Ethylene-responsive transcription factor WIN1
TrEMBLA0A0E0JX061e-106A0A0E0JX06_ORYPU; Uncharacterized protein
STRINGBGIOSGA007748-PA1e-105(Oryza sativa Indica Group)
STRINGORGLA02G0073000.11e-105(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37173876
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.11e-39ERF family protein